TRANSPATH Publications
- Kel A, Voss N, Jauregui R, Kel-Margoulis O, Wingender E. (2006)
Beyond microarrays: Find key transcription factors controlling
signal transduction pathways. BMC Bioinformatics 7(Suppl. 2):S13.
[Abstract]
- Krull M, Pistor S, Voss N, Kel A, Reuter I, Kronenberg D,
Michael H, Schwarzer K, Potapov A, Choi C, Kel-Margoulis O,
Wingender E. (2006) TRANSPATH®: An Information Resource for Storing
and Visualizing Signaling Pathways and their Pathological
Aberrations. Nucleic Acids Res 34:D546-D551. [Abstract]
- Kel-Margoulis O, Matys V, Choi C, Reuter I, Krull M, Potapov,
AP, Voss N, Liebich I, Kel A, Wingender E. (2005) "Databases on
Gene Regulation." Chap. 11 in Information Processing And
Living Systems. Singapore: World Scientific Publishing Co. Pte.
Ltd. ISBN 978-1-86094-563-2.
- Choi C, Crass T, Kel A, Kel-Margoulis O, Krull M, Pistor S,
Potapov A, Voss N, Wingender E. (2004) Consistent re-modeling of
signaling pathways and its implementation in the TRANSPATH
database. Genome Inf Ser 15:244-254. [Abstract]
- Choi C, Krull M, Kel A, Kel-Margoulis O, Pistor S, Potapov A,
Voss N, Wingender, E. (2004) TRANSPATH®– a high quality database
focused on signal transduction. Comp Funct Genom
5:163-168.
- Krull M, Voss N, Choi C, Pistor S, Potapov A, Wingender E.
(2003) TRANSPATH®: an integrated database on signal transduction
and a tool for array analysis. Nucleic Acids Res 31:97-100.
[Abstract]
- Kloos DU, Choi C, Wingender E. (2002) The TGF-beta–Smad
network: introducing bioinformatic tools. Trends Genet 18:96-103.
[Abstract]
- Schacherer F, Choi C, Götze U, Krull M, Pistor S, Wingender E.
(2001) The TRANSPATH signal transduction database: a knowledge base
on signal transduction networks. Bioinformatics 17:1053-1057.
[Abstract]
- Potapov A, Wingender E. (2001) Modeling the architecture of
regulatory networks. Proceedings of the German Conference on
Bioinformatics (GCB '01), GBF Braunschweig, 6-10.
- Wingender E, Chen X, Fricke E, Geffers R, Hehl R, Liebich I,
Krull M, Matys V, Michael H, Ohnhäuser R, Prüß M, Schacherer F,
Thiele S, Urbach S. (2001) The TRANSFAC system on gene expression
regulation. Nucleic Acids Res 29:281-283. [Abstract]
- Wingender E, Chen X, Hehl R, Karas H, Liebich I, Matys V,
Meinhardt T, Prüß M, Reuter I, Schacherer F. (2000) TRANSFAC: an
integrated system for gene expression regulation. Nucleic Acids Res
28:316-319. [Abstract]
- Heinemeyer T, Chen X, Karas H, Kel AE, Kel OV, Liebich I,
Meinhardt T, Reuter I, Schacherer F, Wingender E. (1999) Expanding
the TRANSFAC database towards an expert system of regulatory
molecular mechanisms. Nucleic Acids Res 27:318-22. [Abstract]